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KMID : 1160220200480030240
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Mycobiology
2020 Volume.48 No. 3 p.240 ~ p.244
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Draft Genome Sequence of Alternaria alternata JS-1623, a Fungal Endophyte of Abies koreana
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Park Sook-Young
Jeon Jong-Bum
Kim Jung-A.
Jeon Mi-Jin
Jeong Min-Hye
Kim Young-Min
Lee Ye-Rim
Chung Hyun-Jung
Lee Yong-Hwan
Kim Soon-Ok
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Abstract
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Alternaria alternata JS-1623 is an endophytic fungus isolated from a stem tissue of Korean fir, Abies koreana. Ethyl acetate extracts of culture filtrates exhibited anti-inflammatory activity in LPS induced microglia BV-2 cell without cytotoxicity. Here we report a 33.67?Mb sized genome assembly of JS-1623 comprised of 13 scaffolds with N50 of 4.96?Mb, and 92.41% of BUSCO completeness. GC contents were 50.97%. Of the 11,197 genes annotated, gene families related to the biosynthesis of secondary metabolites or transcription factors were identified.
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KEYWORD
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Abies koreana, Alternaria alternata, endophytes, whole genome sequence
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