KMID : 1160220210490030294
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Mycobiology 2021 Volume.49 No. 3 p.294 ~ p.296
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Draft Genome Sequence of Xylaria grammica EL000614, a Strain Producing Grammicin, a Potent Nematicidal Compound
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Park Sook-Young
Jeon Jong-Bum Kim Jung-A Jeon Mi-Jin Yu Nan-Hee Kim Seul-Bi Park Ae-Ran Kim Jin-Cheol Lee Ye-Rim Kim Young-Min Choi Eu-Ddeum Jeong Min-Hye Lee Yong-Hwan Kim Soon-Ok
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Abstract
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An endolichenic fungus, Xylaria grammica strain EL000614, showed strong nematicidal effects against plant pathogenic nematode, Meloidogyne incognita by producing grammicin. We report genome assembly of X. grammica EL000614 comprised of 25 scaffolds with a total length of 54.73?Mb, N50 of 4.60?Mb, and 99.8% of BUSCO completeness. GC contents of this genome were 44.02%. Gene families associated with biosynthesis of secondary metabolites or regulatory proteins were identified out of 13,730 gene models predicted.
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KEYWORD
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Endolichenic fungi, grammicin, secondary metabolites, whole genome sequence, Xylaria grammica
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