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KMID : 1160220210490030294
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Mycobiology
2021 Volume.49 No. 3 p.294 ~ p.296
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Draft Genome Sequence of Xylaria grammica EL000614, a Strain Producing Grammicin, a Potent Nematicidal Compound
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Park Sook-Young
Jeon Jong-Bum
Kim Jung-A
Jeon Mi-Jin
Yu Nan-Hee
Kim Seul-Bi
Park Ae-Ran
Kim Jin-Cheol
Lee Ye-Rim
Kim Young-Min
Choi Eu-Ddeum
Jeong Min-Hye
Lee Yong-Hwan
Kim Soon-Ok
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Abstract
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An endolichenic fungus, Xylaria grammica strain EL000614, showed strong nematicidal effects against plant pathogenic nematode, Meloidogyne incognita by producing grammicin. We report genome assembly of X. grammica EL000614 comprised of 25 scaffolds with a total length of 54.73?Mb, N50 of 4.60?Mb, and 99.8% of BUSCO completeness. GC contents of this genome were 44.02%. Gene families associated with biosynthesis of secondary metabolites or regulatory proteins were identified out of 13,730 gene models predicted.
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KEYWORD
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Endolichenic fungi, grammicin, secondary metabolites, whole genome sequence, Xylaria grammica
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